Search results for "genetics [Transcriptome]"

showing 10 items of 3033 documents

Targeted Repolarization of Tumor‐Associated Macrophages via Imidazoquinoline‐Linked Nanobodies

2021

Abstract Tumor‐associated macrophages (TAMs) promote the immune suppressive microenvironment inside tumors and are, therefore, considered as a promising target for the next generation of cancer immunotherapies. To repolarize their phenotype into a tumoricidal state, the Toll‐like receptor 7/8 agonist imidazoquinoline IMDQ is site‐specifically and quantitatively coupled to single chain antibody fragments, so‐called nanobodies, targeting the macrophage mannose receptor (MMR) on TAMs. Intravenous injection of these conjugates result in a tumor‐ and cell‐specific delivery of IMDQ into MMRhigh TAMs, causing a significant decline in tumor growth. This is accompanied by a repolarization of TAMs to…

Lung NeoplasmsGeneral Chemical Engineeringmedicine.medical_treatmentGeneral Physics and AstronomyMedicine (miscellaneous)TLR 7/8 agonist02 engineering and technology01 natural scienceschemistry.chemical_compoundCancer immunotherapyTumor-Associated MacrophagesTumor MicroenvironmentMacrophageM2 macrophagesGeneral Materials ScienceReceptorResearch ArticlesMice KnockoutMembrane GlycoproteinsChemistrytumor associated macrophagesQGeneral EngineeringImidazoles021001 nanoscience & nanotechnologynanobodiesmedicine.anatomical_structureDrug deliveryQuinolines0210 nano-technologyMannose ReceptorResearch ArticleT cellScience010402 general chemistryBiochemistry Genetics and Molecular Biology (miscellaneous)Immune systemmedicineAnimalsrepolarizationcancer immunotherapyCancerSingle-Domain Antibodiesmedicine.disease0104 chemical sciencesImidazoquinolineMice Inbred C57BLDisease Models AnimalToll-Like Receptor 6Toll-Like Receptor 7drug deliveryCancer research
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Is the Macrophage Phenotype Determinant for Fibrosis Development?

2021

Fibrosis is a pathophysiological process of wound repair that leads to the deposit of connective tissue in the extracellular matrix. This complication is mainly associated with different pathologies affecting several organs such as lung, liver, heart, kidney, and intestine. In this fibrotic process, macrophages play an important role since they can modulate fibrosis due to their high plasticity, being able to adopt different phenotypes depending on the microenvironment in which they are found. In this review, we will try to discuss whether the macrophage phenotype exerts a pivotal role in the fibrosis development in the most important fibrotic scenarios.

Lungpulmonary fibrosisQH301-705.5business.industryCardiac fibrosiscardiac fibrosiskidney fibrosisMedicine (miscellaneous)Connective tissueReviewmedicine.diseasePhenotypeGeneral Biochemistry Genetics and Molecular BiologymacrophagesExtracellular matrixmedicine.anatomical_structureFibrosisPulmonary fibrosisintestinal fibrosisCancer researchmedicineMacrophageBiology (General)businessliver fibrosisBiomedicines
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Acid Dnase Activities In Peripheral, Mononuclear Blood Cells: A Possible Parameter To Detect Proliferating Cell Populations

1992

After electrophoresis in DNA -containing polyacrylamide gels, two acid DNase activities can be detected in peripheral, mononuclear cells of the human blood. One of these acid DNase activities correlates with cell proliferation; its isoelectrical point is at pI 7.4. By means of this DNase activity, a quantity of less than 1% leukemic cells can be detected. The increased acid DNase activity can indicate the proliferation of malignant cell populations and possibly the proliferation of cell populations during immunological reactions

LymphocyteCellBiologyLymphocyte ActivationIsozymePeripheral blood mononuclear cellGeneral Biochemistry Genetics and Molecular Biologychemistry.chemical_compoundReference ValuesmedicineHumansDeoxyribonuclease IILymphocyteschemistry.chemical_classificationDeoxyribonucleasesCell growthfood and beveragesDNAHydrogen-Ion ConcentrationPrecursor Cell Lymphoblastic Leukemia-LymphomaIsoenzymesmedicine.anatomical_structureEnzymeBiochemistrychemistryElectrophoresis Polyacrylamide GelIsoelectric FocusingDNAZeitschrift für Naturforschung C
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Optimized RNA extraction and northern hybridization in streptomycetes.

2010

Abstract Northern blot hybridization is a useful tool for analyzing transcript patterns. To get a picture of what really occurs in vivo, it is necessary to use a protocol allowing full protection of the RNA integrity and recovery and unbiased transfer of the entire transcripts population. Many protocols suffer from severe limitations including only partial protection of the RNA integrity and/or loss of small sized molecules. Moreover, some of them do not allow an efficient and even transfer in the entire sizes range. These difficulties become more prominent in streptomycetes, where an initial quick lysis step is difficult to obtain. We present here an optimized northern hybridization protoc…

LysisPopulationtotal RNA purificationComputational biologyBiologynorthern hybridizationSettore BIO/19 - Microbiologia GeneraleStreptomycesGeneral Biochemistry Genetics and Molecular BiologyRNA degradationNorthern bloteducationlcsh:QH301-705.5GeneticsRNA glyoxylationeducation.field_of_studylcsh:R5-920streptomyceteBiochemistry Genetics and Molecular Biology(all)alkaline blottingMethodologyRNAbiology.organism_classificationBlotNorthern hybridizationSettore BIO/18 - Geneticalcsh:Biology (General)RNA processingstreptomycetesRNA extractionlcsh:Medicine (General)Biological procedures online
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JNK ‐dependent gene regulatory circuitry governs mesenchymal fate

2015

The epithelial to mesenchymal transition (EMT) is a biological process in which cells lose cell-cell contacts and become motile. EMT is used during development, for example, in triggering neural crest migration, and in cancer metastasis. Despite progress, the dynamics of JNK signaling, its role in genomewide transcriptional reprogramming, and involved downstream effectors during EMT remain largely unknown. Here, we show that JNK is not required for initiation, but progression of phenotypic changes associated with EMT. Such dependency resulted from JNK-driven transcriptional reprogramming of critical EMT genes and involved changes in their chromatin state. Furthermore, we identified eight no…

MAP Kinase Kinase 4MAP Kinase Signaling SystemCellular differentiationGene regulatory networkBiologyTime-Lapse ImagingGeneral Biochemistry Genetics and Molecular BiologyCell LineMesodermTranscriptometranscription factorsmetastasisHumansGene Regulatory NetworksEpithelial–mesenchymal transitionMolecular BiologyTranscription factorJNK signalingGeneticsRegulation of gene expressionGeneral Immunology and MicrobiologyGene Expression ProfilingGeneral NeuroscienceCell CycleEMTCell DifferentiationArticles3. Good healthChromatinCell biologyembryonic structuresgene regulationReprogrammingThe EMBO Journal
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Exercise and hormesis: activation of cellular antioxidant signaling pathway.

2006

Contraction-induced production of reactive oxygen species (ROS) has been shown to cause oxidative stress to skeletal muscle. As an adaptive response, muscle antioxidant defense systems are upregulated after heavy exercise. Nuclear factor (NF) kappaB and mitogen-activated protein kinases (MAPKs) are the major oxidative stress-sensitive signal transduction pathways in mammalian tissues. Activation of NF-kappaB signaling cascade has been shown to enhance the gene expression of important enzymes, such as mitochondrial superoxide dismutase (MnSOD) and inducible nitric oxide synthase (iNOS). MAPK activations are involved in a variety of cellular functions including growth, proliferation, and adap…

MAPK/ERK pathwayNitric Oxide Synthase Type IIBiologymedicine.disease_causeModels BiologicalGeneral Biochemistry Genetics and Molecular BiologyAntioxidantsGene Expression Regulation EnzymologicHistory and Philosophy of ScienceDownregulation and upregulationPhysical Conditioning AnimalmedicineAnimalsMuscle Skeletalchemistry.chemical_classificationReactive oxygen speciesKinaseSuperoxide DismutaseGeneral NeuroscienceNF-kappa BSkeletal muscleCell biologyMitochondriaNitric oxide synthaseEnzyme ActivationKineticsmedicine.anatomical_structurechemistrybiology.proteinSignal transductionMitogen-Activated Protein KinasesReactive Oxygen SpeciesOxidative stressSignal TransductionAnnals of the New York Academy of Sciences
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Global Functional Analyses of Cellular Responses to Pore-Forming Toxins

2011

Here we present the first global functional analysis of cellular responses to pore-forming toxins (PFTs). PFTs are uniquely important bacterial virulence factors, comprising the single largest class of bacterial protein toxins and being important for the pathogenesis in humans of many Gram positive and Gram negative bacteria. Their mode of action is deceptively simple, poking holes in the plasma membrane of cells. The scattered studies to date of PFT-host cell interactions indicate a handful of genes are involved in cellular defenses to PFTs. How many genes are involved in cellular defenses against PFTs and how cellular defenses are coordinated are unknown. To address these questions, we pe…

MAPK/ERK pathwayTranscription GeneticImmunology/Innate ImmunityMessengerInteractomeInfectious Diseases/Bacterial InfectionsRNA interference2.1 Biological and endogenous factorsAetiologyBiology (General)Genes HelminthCaenorhabditis elegansOligonucleotide Array Sequence AnalysisGenetics0303 health sciencesGenomebiologyReverse Transcriptase Polymerase Chain ReactionGenetics and Genomics/Functional Genomics030302 biochemistry & molecular biologyrespiratory systemCell biologyInfectious DiseasesMedical MicrobiologyRNA InterferenceSignal transductionDNA microarrayTranscriptionBiotechnologyResearch ArticleSignal TransductionPore Forming Cytotoxic ProteinsQH301-705.5Virulence FactorsMAP Kinase Signaling System1.1 Normal biological development and functioningBacterial ToxinsImmunologyMicrobiologyDNA-binding proteinCell Line03 medical and health sciencesBacterial ProteinsGeneticUnderpinning researchVirologyEscherichia coliHelminthGeneticsAnimalsHumansRNA MessengerCaenorhabditis elegansCaenorhabditis elegans ProteinsMolecular BiologyGene030304 developmental biologyGenome HelminthCell MembraneGenetics and GenomicsRC581-607biology.organism_classificationrespiratory tract diseasesTranscription Factor AP-1Emerging Infectious DiseasesGenesRNAParasitologyGeneric health relevanceRNA HelminthImmunologic diseases. AllergyPLoS Pathogens
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Apoptosis induced in vascular smooth muscle cells by oxidative stress is partly prevented by pretreatment with CGRP.

2003

MAPK/ERK pathwaymedicine.medical_specialtyVascular smooth muscleMitogen-Activated Protein Kinase 3Calcitonin Gene-Related PeptideNeuropeptideApoptosisCalcitonin gene-related peptidemedicine.disease_causeGeneral Biochemistry Genetics and Molecular BiologyMuscle Smooth VascularHistory and Philosophy of ScienceInternal medicinemedicine.arterymedicineAnimalsRats WistarAortaCells CulturedMitogen-Activated Protein Kinase 1AortaMitogen-Activated Protein Kinase 3ChemistryGeneral NeuroscienceRatsEnzyme ActivationOxidative StressEndocrinologyApoptosisMitogen-Activated Protein KinasesOxidative stressAnnals of the New York Academy of Sciences
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Pelagic calcium carbonate production and shallow dissolution in the North Pacific Ocean

2023

Funding: Funding was provided by NSF Grants OCE1220600 and OCE1220302 awarded to JA and WB, respectively, MINECO PID2020-113526RB-I00, the Generalitat de Catalunya MERS (#2017 SGR-1588) awarded to PZ and NERC grant NE/N011716/1 awarded to JR. Planktonic calcifying organisms play a key role in regulating ocean carbonate chemistry and atmospheric CO2. Surprisingly, references to the absolute and relative contribution of these organisms to calcium carbonate production are lacking. Here we report quantification of pelagic calcium carbonate production in the North Pacific, providing new insights on the contribution of the three main planktonic calcifying groups. Our results show that coccolithop…

MCCMultidisciplinaryGEClimate ChangeGeneral Physics and AstronomyDASCarbon cycleGeneral ChemistrySettore GEO/01 - Paleontologia E PaleoecologiaGeneral Biochemistry Genetics and Molecular BiologyMarine chemistryCoccolithophore[SDU]Sciences of the Universe [physics]CO2GE Environmental Sciences
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Asteroceras langi Dommergues & Meister, un hommage au Professeur J. Lang.

2007

4 pages; Une espèce d'ammonite du Sinémurien supérieur du Maroc, Asteroceras langi Dommergues & Meister, dédiée au professeur J. Lang est présentée à nouveau à l'occasion de ce mémoire jubilé.

MESH : Jurassique inférieur[SDV.BID.SPT] Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomyMESH : AsteroceratinaeMESH : Ammonite[SDU.STU.PG] Sciences of the Universe [physics]/Earth Sciences/PaleontologyMESH : Maroc[ SDV.BID.SPT ] Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy[ SDU.STU.PG ] Sciences of the Universe [physics]/Earth Sciences/Paleontology
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